dna_methylation_calling
Per-isolate bacterial DNA methylation calling from ONT modified-basecalled BAMs,
built for characterizing the methylome landscape across a diverse panel of clinical
isolates — not for confirming any one gene’s activity. (Named explicitly dna_ because
“methylation” alone is ambiguous — this is not histone or RNA methylation.)
Status: 
in development. Every stage has been validated against synthetic
ground-truth fixtures and real Docker execution, but the pi
This is a companion discussion topic for the original entry at github.com/alex-omics/microbial-genomics-wdl/dna_methylation_calling