github.com/aryeelab/nanopore-tools/BamToBigWig

Oxford nanopore tools

Installing dependencies

  • Install Homebrew
  • Install cromwell
brew install cromwell
  • Install Docker

Benchmarking DNA modification calling

Tools tested:

Tool 5mC (CpG) 5mC (GpC) 6mA Notes
Nanopolish X X

This is a companion discussion topic for the original entry at github.com/aryeelab/nanopore-tools/BamToBigWig