github.com/Barski-lab/ga4gh_challenge

Automatic Tools and Workflows
1

Current workflow is used to run CHIP-Seq basic analysis with single-end input FASTQ file. In outputs it returns coordinate sorted BAM file alongside with index BAI file, quality statistics of the inpu

This is a companion discussion topic for the original entry at https://dockstore.org/workflows/github.com/Barski-lab/ga4gh_challenge
2

The master branch has been updated on GitHub since the Dockstore verification. The updated master branch works with the .yaml file (https://github.com/Barski-lab/ga4gh_challenge/blob/master/biowardrobe_chipseq_se.yaml) if the input files are downloaded from the GitHub repository using instructions provided in the README.md. The master branch on GitHub no longer contains the .json test parameter file on Dockstore.