IsraBact WDL Workflows (v1.0)
De-novo genome assembly, taxonomic ID, genes and species typing, alleles comparison, and virulence prediction from paired-end bacterial NGS data.
This project contains WDL (Workflow Description Language) workflows based on Theiagen - Public Health Bioinformatics pipelines and tools such as Kraken2, BLAST, and ListPred.
These WDLs are designed to be executed via MiniWDL or Cromwell with Docker backend support.
This is a companion discussion topic for the original entry at github.com/BioinfoMohIL/IsraBact/Get_File_Size_MOH