github.com/broadinstitute/long-read-pipelines/ONTWholeGenomePlasmid

A workflow that performs single sample variant calling on Oxford Nanopore reads from one or more flow cells. The workflow merges multiple flowcells into a single BAM prior to variant calling.


This is a companion discussion topic for the original entry at github.com/broadinstitute/long-read-pipelines/ONTWholeGenomePlasmid