github.com/broadinstitute/TAG-public/cnvArrayProber

This workflow takes a CNV bed file and CytoSNP-850K and GDA support files as input and outputs a csv file with probe information for each CNV interval. Additionally, output a PDF file with plots for each CNV interval the number of probes in the CytoSNP-850K and GDA arrays.


This is a companion discussion topic for the original entry at github.com/broadinstitute/TAG-public/cnvArrayProber