PacBio TRGT: Tandem Repeat Genotyper implemented in Workflow Description Language (WDL)
This repository contains a WDL workflow for processing PacBio HiFi data using the TRGT tool. trgt profiles sequence composition, mosaicism, and CpG methylation of analyzed repeats.
Docker images containing the tools used by this workflow can be explored [in DNAstack’s image repository](https:/
This is a companion discussion topic for the original entry at github.com/DNAstack/pacbio-trgt-pipeline