github.com/frankp-0/HAUDI_workflow/score_pgs

HAUDI_workflow

WDL Workflow to run HAUDI
(and the related method GAUDI) on AnVIL.

This repository contains WDL code, corresponding JSON input examples, test data,
and a Dockerfile. The docker image corresponding the Dockerfile is available on
Docker Hub: frankpo/run_haudi.

This repository contains five workflows:

  • vcf_to_plink2: Convert a set of vcf files to plink2 pgen files
  • [convert_la

This is a companion discussion topic for the original entry at github.com/frankp-0/HAUDI_workflow/score_pgs