github.com/MethodsDev/LongReadAlignmentAssembler/LRAA-singlecell

Long Read Alignment Assembler (LRAA)

Isoform Discovery and/or Quantification from Long Read RNA-Seq

Visit the LRAA wiki for user documentation

Resource usage monitoring (optional)

Lightweight CPU and memory sampling is enabled by default to help size runs and tune parallelism:

  • Disable monitoring: pass --no_monitor_resources
  • Sampling interval: --monitor_interval <seconds> (default 60.0)
  • Include child processes:

This is a companion discussion topic for the original entry at github.com/MethodsDev/LongReadAlignmentAssembler/LRAA-singlecell