github.com/mgbpm/biofx-workflows/BahrainPipelinesWorkflow

Bahrain Pipelines Workflow

Input Parameters

| Type | Name | Req’d | Description | Default Value |
| Array[File] | dataset_files | Yes | An array of VCF files from the dataset/batch | |
| String | sample_prefix | No | Prefix for file naming and FAST annotation naming | “BGP” |
| String | batch | Yes | Name of batch; either a number or name | |
| Boolean | is_batch_number | Yes | Whether the batch input is a number or name for file naming conventions (true == number) | |
| File | merged_data


This is a companion discussion topic for the original entry at github.com/mgbpm/biofx-workflows/BahrainPipelinesWorkflow