github.com/mgbpm/biofx-workflows/PRSMixModelWorkflow

Make Mix Model Workflow

Input Parameters

Type Name Req’d Description Default Value
File condition_name Yes Name of condition/disease
Array[File] var_weights Yes Array of different PGS variant weight files, with 3 columns: variant ID, effect allele, and score
File pca_variants Yes Variants used in PCA projection
File reference_vcf Yes Reference VCF of population for creating/training model
F

This is a companion discussion topic for the original entry at github.com/mgbpm/biofx-workflows/PRSMixModelWorkflow