github.com/talkowski-lab/lr-annotation/PALMER

[system]

Long-Read Annotation

Pipeline for long-read callset annotation.

Pipeline Steps

• AnnotateSVAN.wdl.
• AnnotateVEPHail.wdl.
• AnnotateSVAnnotate.wdl.
• AnnotateVcf.wdl.
• Bencharmking & QC:
  • BenchmarkAnnotations.wdl.
  • BenchmarkAnnotateo.wdl.

Annotation Workflows

AnnotateSVAN.wdl

This workflow leverages [SVAN](h

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This is a companion discussion topic for the original entry at github.com/talkowski-lab/lr-annotation/PALMER