This repository contains PRIMED queries of the PGS Catalog using the PGS Catalog API.

Mapping PubmedIDs to the PGS catalog

The python script can be used to map a list of PubmedIDs to the PGS catalog.
The script requires a csv file containing a list of PubmedIDs (one per line).
The script will output a tsv file containing the PubmedIDs and the corresponding PGS PGP_IDs, PGS_IDs and PGS

This is a companion discussion topic for the original entry at