PCAWG MuSE variant calling workflow is developed by MD Anderson Cancer Center
(http://bioinformatics.mdanderson.org/main/MuSE), it consists of software component calling structural
variants using uniformly aligned tumor / normal WGS sequences. The workflow has been dockerized and
packaged using CWL workflow language, the source code is available on GitHub
at: https://github.com/ICGC-TCGA-PanCancer/pcawg-muse.

Run the workflow with your own data

Prepare compute environment and install s

This is a companion discussion topic for the original entry at quay.io/pancancer/pcawg-muse