Registry.hub.docker.com/pfda2dockstore/clamms_normalize_coverage/clamms_normalize_coverage

This app was exported from precisionFDA (https://precision.fda.gov).
It was created by Evan Maxwell, Regeneron Genetics Center - Genome Informatics.

For detailed documentation on CLAMMS, please refer to the associated publication (http://bioinformatics.oxfordjournals.org/content/32/1/133.long) and github page (https://github.com/rgcgithub/clamms).

This app will calculate read depth for a given set of target regions (target_bed_file) using samtools depth, followed by computation of coverage


This is a companion discussion topic for the original entry at registry.hub.docker.com/pfda2dockstore/clamms_normalize_coverage/clamms_normalize_coverage