This app was exported from precisionFDA (https://precision.fda.gov).
It was created by Adam Halstead, Human & Molecular Genetics Center Medical College of Wisconsin.
SnpSift filter is one of the most useful SnpSift commands.
Using SnpSift filter you can filter VCF files using arbitrary expressions, for instance:
"(QUAL > 30) | (exists INDEL) | ( countHet() > 2 )".
The actual expressions can be quite complex, so it allows for a lot of flexibility.
[Documentation: http://snpeff.sourc
This is a companion discussion topic for the original entry at registry.hub.docker.com/pfda2dockstore/snpsift-filter/snpsift-filter