Automatic Tools and Workflows


Topic Replies Activity
About the Automatic Tools and Workflows category 1 August 13, 2019
Github.com/hall-lab/sv-pipeline/sv-postmerge 1 February 28, 2020
github.com/broadinstitute/long-read-pipelines/ONT10xSingleFlowcell 1 February 28, 2020
github.com/broadinstitute/long-read-pipelines/ONTWholeGenomeSingleFlowcell 1 February 28, 2020
github.com/broadinstitute/long-read-pipelines/PBCCSWholeGenomeSingleFlowcell 1 February 28, 2020
github.com/broadinstitute/long-read-pipelines/PBCLRWholeGenomeSingleFlowcell 1 February 28, 2020
github.com/broadinstitute/long-read-pipelines/PBCCSOnlySingleFlowcell 1 February 26, 2020
Github.com/hall-lab/sv-pipeline/sv-merge1 1 February 23, 2020
Github.com/hall-lab/sv-pipeline/sv-premerge 1 February 20, 2020
Github.com/vgteam/vg_wdl/vg_mapgaffe_call_sv_cram 1 January 30, 2020
Github.com/denis-yuen/bcellmagic 1 January 28, 2020
Github.com/brwnj/covviz 1 January 27, 2020
github.com/gatk-workflows/gatk4-genome-processing-pipeline/WholeGenomeGermlineSingleSample 1 January 26, 2020
Github.com/genome/qc-analysis-pipeline 1 January 24, 2020
Github.com/vgteam/vg_wdl/vg_map_call_sv_cram 1 January 24, 2020
Github.com/genome/five-dollar-genome-analysis-pipeline 1 January 22, 2020
github.com/sevenbridges-openworkflows/Broad-Best-Practice-Somatic-CNV-Workflows/GATK-Somatic-CNV-Panel-Workflow 1 January 22, 2020
github.com/sevenbridges-openworkflows/Broad-Best-Practice-Somatic-CNV-Workflows/GATK-Somatic-CNV-Pair-Workflow 1 January 22, 2020
github.com/tpesout/vgp-assembly/HelloWorldFileLocalization 1 January 17, 2020
github.com/xbrianh/xscanpy/cbScanpyHCA 1 January 16, 2020
Github.com/hall-lab/sv-pipeline/sv-pre-merge 1 January 15, 2020
Github.com/hall-lab/sv-pipeline/sv-post-merge 1 January 15, 2020
Github.com/hall-lab/sv-pipeline/sv-merge 1 January 15, 2020
Github.com/bespin-workflows/exomeseq-gatk4 1 January 15, 2020
github.com/sevenbridges-openworkflows/Broad-Best-Practice-Germline-snps-and-indels-variant-calling-CWL1.0-workflow-GATK-4.1.0.0 1 January 15, 2020
github.com/tpesout/vgp-assembly/MarginPolishAssembly 1 January 14, 2020
github.com/broadinstitute/genomestrip-terra/gs_analyze_C4AB_batch 1 January 7, 2020
github.com/AnalysisCommons/genesis_wdl/genesis_GWAS 1 January 6, 2020
Github.com/brwnj/smoove-wdl/smoove-wdl 1 January 6, 2020
github.com/NatalieEO/Seqware-BWA-Workflow-make-this-a-really-long-name-help-long-cat 1 December 19, 2019