Automatic Tools and Workflows


Topic Replies Activity
About the Automatic Tools and Workflows category 1 August 13, 2019
Github.com/gatk-workflows/generic-wdl-script/generic-workflow 1 November 14, 2019
github.com/ll3515/Terra_test 1 November 14, 2019
github.com/neurogenomics/WDLtest/WDLtest 1 November 13, 2019
Github.com/eturkes/terra-test 1 November 13, 2019
dockstore.org/zijing-liu/Test 1 November 13, 2019
Github.com/gatk-workflows/gatk4-germline-snps-indels/gatk4-germline-snps-indels-haplotypecaller-gvcf-calling 1 November 7, 2019
github.com/sevenbridges-openworkflows/Broad-Best-Practice-Data-pre-processing-CWL1.0-workflow-GATK-4.1.0.0/GATK_4_1_0_0_data_pre_processing_workflow 1 October 31, 2019
github.com/large-scale-gxe-methods/GEM/gem-workflow 1 October 30, 2019
Github.com/large-scale-gxe-methods/probabel-workflow/probabel-workflow 1 October 30, 2019
Github.com/large-scale-gxe-methods/genotype-conversion/genotype-conversion 1 October 29, 2019
Github.com/coverbeck/xenahub 1 October 21, 2019
github.com/DataBiosphere/topmed-workflow-variant-calling 1 October 18, 2019
Github.com/wshands/hmmer-docker 1 October 18, 2019
Quay.io/icgc-argo/bwa-mem-aligner 1 October 16, 2019
github.com/CRI-iAtlas/iatlas-workflows/EPIC 1 October 15, 2019
github.com/CRI-iAtlas/iatlas-workflows/SamToFastq 1 October 15, 2019
github.com/CRI-iAtlas/iatlas-workflows/MiXCRPairedEnd 1 October 15, 2019
github.com/CRI-iAtlas/iatlas-workflows/MiXCRSingleEnd 1 October 15, 2019
github.com/CRI-iAtlas/iatlas-workflows/MiTCRSingleEnd 1 October 15, 2019
github.com/CRI-iAtlas/iatlas-workflows/MiTCRPairedEnd 1 October 15, 2019
github.com/CRI-iAtlas/iatlas-workflows/KallistoPairedEnd 1 October 15, 2019
github.com/CRI-iAtlas/iatlas-workflows/KallistoSingleEnd 1 October 15, 2019
github.com/CRI-iAtlas/iatlas-workflows/MCPcounter 1 October 15, 2019
github.com/CRI-iAtlas/iatlas-workflows/ImmuneSubtypeClustering 1 October 15, 2019
github.com/CRI-iAtlas/iatlas-workflows/Cibersort 1 October 15, 2019
Registry.hub.docker.com/mruffalo/star-grch38/star-2_6_1e 1 October 15, 2019
Github.com/hubmapconsortium/ucsd-snareseq-pipeline 1 October 15, 2019
Github.com/nf-core/sarek 1 October 9, 2019
Github.com/vgteam/vg_wdl/vg_map_call_sv 1 October 4, 2019