Automatic Tools and Workflows


Topic Replies Activity
About the Automatic Tools and Workflows category 1 August 13, 2019
github.com/tpesout/vgp-assembly/HelloWorldFileLocalization 1 January 17, 2020
github.com/xbrianh/xscanpy/cbScanpyHCA 1 January 16, 2020
Github.com/hall-lab/sv-pipeline/sv-pre-merge 1 January 15, 2020
Github.com/hall-lab/sv-pipeline/sv-post-merge 1 January 15, 2020
Github.com/hall-lab/sv-pipeline/sv-merge 1 January 15, 2020
Github.com/bespin-workflows/exomeseq-gatk4 1 January 15, 2020
github.com/sevenbridges-openworkflows/Broad-Best-Practice-Germline-snps-and-indels-variant-calling-CWL1.0-workflow-GATK-4.1.0.0 1 January 15, 2020
github.com/tpesout/vgp-assembly/MarginPolishAssembly 1 January 14, 2020
github.com/broadinstitute/genomestrip-terra/gs_analyze_C4AB_batch 1 January 7, 2020
github.com/AnalysisCommons/genesis_wdl/genesis_GWAS 1 January 6, 2020
Github.com/brwnj/smoove-wdl/smoove-wdl 1 January 6, 2020
github.com/NatalieEO/Seqware-BWA-Workflow-make-this-a-really-long-name-help-long-cat 1 December 19, 2019
github.com/HumanCellAtlas/skylab/multisample_smartseq2 1 December 17, 2019
github.com/HumanCellAtlas/skylab/Smart-seq2_Multi_Sample 1 December 17, 2019
Github.com/vdauwera/genomics-book 1 December 16, 2019
Github.com/hubmapconsortium/salmon-rnaseq 1 December 11, 2019
Github.com/large-scale-gxe-methods/gem-workflow/gem-workflow 1 December 11, 2019
github.com/rishimp/gatk4-data-processing/Processing-For-Variant-Discovery-Dec-08-2019 1 December 8, 2019
Github.com/gatk-workflows/gatk4-germline-snps-indels/haplotypecaller-gvcf-gatk4 1 December 6, 2019
Dockstore.org/denis-yuen/test 1 December 5, 2019
github.com/broadinstitute/palantir-workflows/BenchmarkVCFs 1 December 4, 2019
Github.com/broadinstitute/gatk-sv-clinical 1 December 3, 2019
github.com/HumanCellAtlas/skylab/Optimus_test_LK 1 December 2, 2019
github.com/gatk-workflows/gatk4-germline-snps-indels/JointGenotyping-terra 1 December 2, 2019
github.com/gatk-workflows/gatk4-germline-snps-indels/JointGenotyping 1 December 2, 2019
github.com/DNAstack/mssng-db6-vqsr 1 November 28, 2019
github.com/DNAstack/mssng-db6-variant-metrics 1 November 28, 2019
github.com/DNAstack/mssng-db6-joint-genotype-merge-by-chr 1 November 28, 2019
github.com/DNAstack/mssng-db6-joint-genotype-by-region 1 November 28, 2019