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About the Automatic Tools and Workflows category
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491
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August 13, 2019
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github.com/talkowski-lab/lr-pipeline/ConcatenateVcfsAcrossContigs
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September 5, 2026
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github.com/talkowski-lab/lr-pipeline/ExtractRandomCalls
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September 4, 2026
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github.com/AoU-Multiomics-Analysis/prepare_QTL/rnaseqc2_aggregate_batched
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September 3, 2026
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github.com/jimin001/WDLs/DeepSomaticFilterNN_run_inference
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September 3, 2026
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github.com/AoU-Multiomics-Analysis/prepare_QTL/prepare_cell_type_eQTL
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September 3, 2026
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github.com/AoU-Multiomics-Analysis/prepare_QTL/cell_type_deconvolution
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September 3, 2026
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Github.com/iwc-lab-workflows/average-bigwig-between-replicates/main
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September 2, 2026
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github.com/broadinstitute/warp/MapMyCells
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September 2, 2026
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github.com/broadinstitute/warp/TestMapMyCells
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September 2, 2026
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github.com/broadinstitute/gatk-sv/PerSampleVariantCountSizeSummaryAcrossContigs
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September 2, 2026
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github.com/caoyumingcym-del/CellBender
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September 2, 2026
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github.com/talkowski-lab/lr-pipeline/FillFormatFields
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September 2, 2026
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github.com/talkowski-lab/lr-pipeline/SplitVcfPerContig
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September 2, 2026
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github.com/talkowski-lab/lr-pipeline/SummarizeAnnotations
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September 1, 2026
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github.com/fabio-cunial/callset_integration_phase2/TruvariAnnoRemap
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September 1, 2026
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github.com/fabio-cunial/callset_integration_phase2/UltralongCreateRemapChunks
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September 1, 2026
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github.com/talkowski-lab/lr-pipeline/ConcatenateMosDepth
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September 1, 2026
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github.com/fabio-cunial/callset_integration_phase2/SubsetVcfToGivenSamples
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September 1, 2026
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github.com/AoU-Multiomics-Analysis/susieR/CheckpointedWindowSusie
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August 31, 2026
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github.com/broadinstitute/MDL-workflows/MergeBams
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August 31, 2026
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github.com/talkowski-lab/lr-pipeline/FilterLowCoverageRegions
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August 31, 2026
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github.com/fabio-cunial/callset_integration_phase2/GetCompositeSvsBnd
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August 31, 2026
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github.com/talkowski-lab/lr-pipeline/GLNexus
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August 31, 2026
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github.com/watronfire/I-Like-WDLs/generate-fake-reads
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August 31, 2026
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github.com/bamsikpang/glimpse_wdl_km/PhaseLigateOnly
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August 31, 2026
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github.com/bamsikpang/glimpse_wdl_km/PhaseLigate
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August 31, 2026
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github.com/bamsikpang/glimpse_wdl_km/RepackGL
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August 31, 2026
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github.com/fabio-cunial/callset_integration_phase2/GetCompositeSvsBndUltralong
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0
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August 30, 2026
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github.com/talkowski-lab/lr-pipeline/CreateDepthIntervals
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1
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August 30, 2026
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