I want to use the yaml (.dockstore.yml
) validation tool.
dockstore yaml validate --path directory/of/.dockstore.yml
However, I don’t see the dockstore yaml
command with the dockstore
CLI on my Fedora Linux 36. Could you tell me how to use it? Thank you.
$ java --version
openjdk 17.0.4 2022-07-19
OpenJDK Runtime Environment (Red_Hat-17.0.4.0.8-1.fc36) (build 17.0.4+8)
OpenJDK 64-Bit Server VM (Red_Hat-17.0.4.0.8-1.fc36) (build 17.0.4+8, mixed mode, sharing)
$ dockstore --version
Current version : 1.12.0
You have the most recent stable release.
If you wish to upgrade to the latest unstable version, please use the following command:
dockstore --upgrade-unstable
Dockstore version 1.12.0
You are running the latest stable version...
If you wish to upgrade to the latest unstable version, please use the following command:
dockstore --upgrade-unstable
$ ls .dockstore.yml
.dockstore.yml
$ dockstore yaml validate --path .
Current version : 1.12.0
You have the most recent stable release.
If you wish to upgrade to the latest unstable version, please use the following command:
dockstore --upgrade-unstable
20:01:50.647 [main] ERROR io.dockstore.client.cli.ArgumentUtility - dockstore: yaml is not a dockstore command. See 'dockstore --help'.
Edit: Perhaps the commit Feature/dock 2129/yaml file check (#161) · dockstore/dockstore-cli@033e5b7 · GitHub available from the version 1.13.0-rc.0 enables the dockstore yaml
command?