prepare_QTL
Pipeline for preparing molecular phenotype and genotype data for QTL (Quantitative Trait Loci) analysis. Supports expression (eQTL), splicing (sQTL), and proteomics (pQTL) data types.
Repository Structure
prepare_QTL/
├── scripts/ # R scripts for data processing and normalization
├── workflows/ # WDL workflows for running analyses on a cloud platform
├── envs/ # Docker environments
└── docs/ # Detailed documentation
Documentation
This is a companion discussion topic for the original entry at github.com/AoU-Multiomics-Analysis/prepare_QTL/merge_methylation