tensorQTL cis Permutations
This repository contains WDL workflows for running cis-QTL mapping with permutations using tensorQTL. Two workflows are provided:
| Workflow | WDL file | Use case |
|---|---|---|
tensorqtl_cis_permutations_workflow |
workflows/tensorqtl_cis_permutations.wdl |
Standard cis-eQTL mapping (expression QTLs) |
tensorqtl_cis_permutations_sqtl_workflow |
workflows/tensorqtl_cis_permutations_sQTL.wdl |
cis-sQTL |
This is a companion discussion topic for the original entry at github.com/AoU-Multiomics-Analysis/tensorQTL_cis_permutations/tensorQTL_permutation