github.com/broadinstitute/depmap_omics/WGS_preprocessing

depmap_omics

have a look at DepMap

What you need to process the Quarterly DepMap-Omics releases from Terra.

Here is a presentation of the pipeline.

Table of Contents


This is a companion discussion topic for the original entry at github.com/broadinstitute/depmap_omics/WGS_preprocessing