github.com/broadinstitute/epi-SHARE-seq-pipeline/SHARE-seq-aggregate-counts

Automatic Tools and Workflows
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Broad Institute of MIT and Harvard SHARE-seq pipeline: sub-workflow to aggregate RNA and ATAC counts.

This is a companion discussion topic for the original entry at github.com/broadinstitute/epi-SHARE-seq-pipeline/SHARE-seq-aggregate-counts