GATK-SV
A structural variation discovery pipeline for Illumina short-read whole-genome sequencing (WGS) data.
For technical documentation on GATK-SV, including how to run the pipeline, please refer to our website.
Repository structure
/.github: Continuous integration (CI) and continuous delivery (CD) workflows/dockerfiles: Resources for building pipeline Docker images/inputs: Files for generating workflow inputs/templates:
This is a companion discussion topic for the original entry at github.com/broadinstitute/gatk-sv/VcfVariantSizeSummary