github.com/broadinstitute/long-read-pipelines/RemoveRedundantReblocksInGVCF

Automatic Tools and Workflows
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A posthoc fix for some gVCF where the concatenation introduces redundant ref blocks

This is a companion discussion topic for the original entry at github.com/broadinstitute/long-read-pipelines/RemoveRedundantReblocksInGVCF