github.com/broadinstitute/MDL-workflows/ShardBamsByBarcodeGroup

Detect the knee cutoff in a barcode counts table, assign barcodes to read-balanced groups, then split minimap2 BAM shards so that each output BAM contains all reads for one barcode group.


This is a companion discussion topic for the original entry at github.com/broadinstitute/MDL-workflows/ShardBamsByBarcodeGroup