Translational Analysis Group (TAG) Public Repo
This github repository contains public Terra workflows maintained by
Translational Analysis Group (TAG). Below is the workflows TAG published.
SmartSeq QC
A pipeline for quality control of Smart Seq single cell analysis:
- SS2_scRNA_pipeline
- SC_Plate_QC
ichorCNA
A workflow that estimates tumor purity and ploidy of blood samples using ultra-low pass (ULP) whole-genome sequencing
(WGS) technology.
- ichorCNA_step1
- ichorCNA_step2
This is a companion discussion topic for the original entry at github.com/broadinstitute/TAG-public/mutect2-gatk4