CDPHE SAR-CoV-2 repository
In this repository you will find all things related to SARS-CoV-2 bioinformatics and analysis. The general directory stucture is as follows:
CDPHE_SARS-CoV-2
| README_SC2_overview.md # this document
|____ workflows # terra workflows and asscoiated scripts and workspace data
| README_CDPHE_SARS-Cov-2_workflow.md
| dockstore.yml
|____ wdls # workflows you can find in dockstore and push to your terra workspace
| SC2_illumina_pe_assemb
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<small>This is a companion discussion topic for the original entry at <a href='https://dockstore.org/workflows/github.com/CDPHE-bioinformatics/CDPHE-SARS-CoV-2/SC2_lineage_calling_and_results'>github.com/CDPHE-bioinformatics/CDPHE-SARS-CoV-2/SC2_lineage_calling_and_results</a></small>