github.com/emilymliau/el-annotations/exportMTtoVCF

annotations

Repository for VEP annotations and “extra” annotations.

Each v0.x is associated with a published Dockstore workflow.

vepAnnotateHail_v0.1.wdl: Dockstore

  • Relatively stable. Currently uses VEP v112 but TODO: edit so using different VEP version inputs only involves changing a few WDL inputs.
  • Plugins:
    • AlphaMissense
    • EVE

vepAnnotateHailMT_v0.1.wdl: https://doc


This is a companion discussion topic for the original entry at github.com/emilymliau/el-annotations/exportMTtoVCF