MAD4HatTeR Pipeline Parameters
This workflow runs the entire MAD4HatTeR pipeline, processing amplicon sequencing FASTQ data to produce allele tables, resistance markers, and other outputs.
Input Parameters
| Input Name | Description | Type | Required | Default |
|--------------------------|---------------------------------------
This is a companion discussion topic for the original entry at github.com/EPPIcenter/mad4hatter-wdl/Mad4hatterComplete