github.com/fabio-cunial/smaht_experiments/MergeAndSubsample

Effect of coverage on somatic SV calling

Metadata of all SMaHT samples at the time of this study.

Liver

We consider the following input:

  • One healthy liver sample (donor ST001 in the benchmarking section of the data portal), sequenced at ~92*6=550x with PacBio Revio and at ~92*6=550x with ONT PromethION 24 (coverages e

This is a companion discussion topic for the original entry at github.com/fabio-cunial/smaht_experiments/MergeAndSubsample