SNV and SV calling Pipeline
A comprehensive Nextflow-based workflow for processing and analyzing Whole Exome Sequencing (WES) data from NGS platforms.
Workflow overview
This pipeline implements bioinformatics best practices and orchestrates multiple industry-standard tools to deliver reproducible, automated, end-to-end analysis — from raw FASTQ files to annotated variant calls.
The workflow supports Docker for full re
This is a companion discussion topic for the original entry at github.com/genespace-workflows/snv-calling