qc-analysis-pipeline
Workflows used for QC of WGS or WES data
Single Sample QC
This WDL pipeline implements QC in human whole-genome or exome/targeted sequencing data.
For more on the metrics and aggregation of metrics from multiple workflow executions, please see the qc-metric-aggregator repository.
Background
As part of the AnVIL Data Processing Working Group, a Quality Control (QC) workflow was devel
This is a companion discussion topic for the original entry at github.com/genome/qc-analysis-pipeline/bam-indexer