Github.com/icgc-argo-workflows/prealnqc/prealnqc

Introduction

icgc-argo-workflows/prealnqc is a reproducible bioinformatics best-practice analysis pipeline of ICGC ARGO Pre Alignment QC Workflow for DNA/RNA Sequencing Reads.

The pipeline is built using Nextflow, a workflow tool to run tasks across multiple compute infrastructures in a very portable manner. It uses Docker/Singularity containers making installation trivial and results highly reproducible. The [Nextflow DSL2](Nextflow — Nextflow documentation


This is a companion discussion topic for the original entry at github.com/icgc-argo-workflows/prealnqc/prealnqc