Alpha Satellite Annotation
This repository holds WDL workflows and Docker build scripts for alpha satellite annotation.
alphaSat-HMMER
WDL of the HumAS-HMMER For AnVIL workflow – which is a modified version of HumAS-HMMER.
Inputs
- input_fastas: genomic assemblies or long contigs. Files must be in fa or fa.gz format
- hmm_profile: main hmm profile
- hmm_profile_SF: hmm profile for creati
This is a companion discussion topic for the original entry at github.com/kmiga/alphaAnnotation/ntrprism-to-bedgraph