Bahrain Sample Prep Workflow
The Bahrain Sample Prep Workflow can be used to run the Bahrain monogenic and screening pipelines. Once either the monogenic or screening pipeline is specified, the workflow will filter Bahrain Genome Project data and create a joint VCF of the samples.
Input Parameters
| Type | Name | Req’d | Description | Default Value |
|---|---|---|---|---|
| Array[String] | sample_ids | Yes | List of sample IDs, e.g. SM-MPPD5; are included in the vcf and c |
This is a companion discussion topic for the original entry at github.com/mgbpm/biofx-workflows/BahrainSamplePrepWorkflow