github.com/mgbpm/biofx-workflows/SubsetShards

Automatic Tools and Workflows
1

SubsetShards Workflow

Workflow to subset the shard files under a specified input directory tree, and (optionally) concatenate the resulting subsets.

Input Parameters

  • String sourcebase - required - the root of the directory tree where the shard files to subset are located; these files are identified by two conditions: (1) having a .vcf.gz extension; and (2) having the component /shards/ in their paths
  • String? shardsbase - optional - the root of the directory tree where FIXME
  • Stri
This is a companion discussion topic for the original entry at github.com/mgbpm/biofx-workflows/SubsetShards