gatk4-data-processing
Purpose :
Workflows for processing high-throughput sequencing data for variant discovery with GATK4 and related tools.
processing-for-variant-discovery-gatk4 :
The processing-for-variant-discovery-gatk4 WDL pipeline implements data pre-processing according to the GATK Best Practices. The workflow takes as input an unmapped BAM list file (text file containing paths to unmapped bam files) to perfor
This is a companion discussion topic for the original entry at github.com/montei5/gatk4-data-processing/gatk4-preprocessing-final