basic_admixture
Workflows to run ADMIXTURE Borrows some code from here.
basic_admixture
This workflow is used to run ADMIXTURE on a genetic dataset (in VCF format). Either unsupervised or supervised mode is supported.
Optionally, the data is pruned for linkage equilibrium, and related individuals are removed.
Inputs:
| input | description |
|---|---|
| vcf | Array of VCF files (possibly split |
This is a companion discussion topic for the original entry at github.com/PRIMED-Ancestry-Inference/basic_admixture/basic_admixture_merged