Github.com/sbg/sbg_dockstore_tools/icgc_pcawg_dkfz_embl_sbg_modified

The DKFZ/EMBL workflow from the ICGC PanCancer Analysis of Whole Genomes (PCAWG) project.
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This workflow is a combination of the ICGC PCAWG Seqware Delly Workflow (EMBL workflow) for structural variation and the ICGC PCAWG DKFZ Workflow workflow for SNVs, indels, and copy number variants.

For more information see the PCAWG project [page](https://dcc.ic


This is a companion discussion topic for the original entry at github.com/sbg/sbg_dockstore_tools/icgc_pcawg_dkfz_embl_sbg_modified