Single Variant workflow runs single-variant association tests. It consists of several steps. Define Segments divides genome into segments, either by a number of segments, or by a segment length. Note that number of segments refers to whole genome, not a number of segments per chromosome. Association test is then performed for each segment in parallel, before combining results on chromosome level. Final step produces QQ and Manhattan plots.
This workflow uses the output from a model fit usin
This is a companion discussion topic for the original entry at github.com/sevenbridges-openworkflows/GENESIS-Single-variant-association-testing