github.com/shadizaheri/FingerprintCheck

Automatic Tools and Workflows
1

FingerprintCheck Workflow

Version: 1.0

Overview

The FingerprintCheck workflow compares two BAM or CRAM files using the Somalier tool to extract and evaluate their genomic fingerprints. This enables validation of sample identity and detection of potential cross-sample contamination or swaps.

Workflow Structure

The workflow consists of the following steps:

  1. Extract Fingerprint
    Using Somalier, this step extracts fingerprint data from the input BAM/CRAM files
This is a companion discussion topic for the original entry at github.com/shadizaheri/FingerprintCheck