bioBakery Workflows

bioBakery workflows is a collection of workflows and tasks for executing
common microbial community analyses using standardized, validated tools
and parameters. Quality control and statistical summary reports are
automatically generated for most data types, which include 16S
amplicons, metagenomes, and metatranscriptomes. Workflows are run
directly from the command line and tasks can be imported to create your
own custom workflows. The workflows and tasks

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