This workflow retrieves the Sequence Read Archive (SRA) accession (SRR) associated with a given BioSample accession. It uses the fastq-dl tool to fetch metadata from SRA and outputs the SRR accession that can be used for downstream analysis.
This is a companion discussion topic for the original entry at github.com/theiagen/public_health_bioinformatics/Update_srr_metadata_PHB