The setup and scripts for setting up Dataproc and using Hail to generate a sparse matrix callset for the UKBB Pharma5 effort.
- A sample map tsv file containing two columns, the sample name and a gs:// path to the sample
- This tsv should include any control samples you want included in your sparse matrix output
- A Google Cloud Services project that has permissions to access the input and output buckets for your batch
- Setup y
This is a companion discussion topic for the original entry at github.com/theisaacwong/tester