Workflow Description Language (WDL) for rMATS
- rmatsTurbo.wdl is a WDL (https://openwdl.org) implementation of the rMATS workflow with BAM files as input
Run on AnVIL
- https://anvil.terra.bio
- Create a new workflow using the AnVIL website and paste or upload rmatsTurbo.wdl
Run with cromwell
- https://github.com/broadinstitute/cromwell
- Create an inp
This is a companion discussion topic for the original entry at github.com/Xinglab/rmats-turbo/rmats-turbo-wdl