Github.com/yuhanhsu/wf-ldsc/ldsc-h2

Automatic Tools and Workflows
1

wf-ldsc

Files for running S-LDSC analysis workflows on Terra

  • Dockerfile: containerize ldsc scripts and dependencies
  • cloudbuild.yaml: build and push docker image to Google Artifact Registry via Cloud Build
  • ldsc-l2.wdl: define workflow to make annotation and compute LD scores for a given gene set
  • ldsc-h2.wdl: define worklofw to partition heritability for a given trait x gene set
  • .dockstore.yml: sync workflows to Dockstore for import to Terra
  • data/: miscellaneous ldsc
This is a companion discussion topic for the original entry at github.com/yuhanhsu/wf-ldsc/ldsc-h2