This app was exported from precisionFDA (
It was created by Pascal Costanza, Intel

elPrep is a high-performance tool for preparing .sam/.bam/.cram files for variant calling in sequencing pipelines. It can be used as a drop-in replacement for SAMtools/Picard, and was extensively tested with different pipelines for variant analysis with GATK. The key advantage of elPrep is that it only performs a single-pass to process a .sam/.bam/.cram file, independent of the number o

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