This app was exported from precisionFDA (https://precision.fda.gov).
It was created by Pascal Costanza, Intel
elPrep is a high-performance tool for preparing .sam/.bam/.cram files for variant calling in sequencing pipelines. It can be used as a drop-in replacement for SAMtools/Picard, and was extensively tested with different pipelines for variant analysis with GATK. The key advantage of elPrep is that it only performs a single-pass to process a .sam/.bam/.cram file, independent of the number o
This is a companion discussion topic for the original entry at registry.hub.docker.com/pfda2dockstore/elprep/elprep